Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023428.1 Corchorus olitorius cultivar O-4 contig23461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10145

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57--82
9
2.9
9
100
0
52
7
0
0
92
0.39
1028--1098
21
3.4
20
86
9
97
42
16
16
23
1.89
1879--2206
41
7.8
41
80
8
351
42
26
10
20
1.85
1879--2207
84
3.9
85
91
2
531
41
26
10
20
1.85
2316--2344
2
15.0
2
92
7
51
48
0
0
51
1.00
2338--2369
14
2.3
14
100
0
64
50
25
0
25
1.50
3764--3818
24
2.3
24
100
0
110
38
30
23
7
1.82

Tables:   1

The End!