Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023452.1 Corchorus olitorius cultivar O-4 contig23485, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18638

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1371--1409
11
3.2
12
85
10
53
53
7
2
35
1.43
1371--1426
24
2.4
23
81
3
67
50
7
5
37
1.53
2447--2510
27
2.3
27
84
15
78
48
0
3
48
1.17
6622--6679
21
2.6
23
86
8
75
50
5
10
34
1.59
7315--7341
9
3.0
9
100
0
54
22
55
11
11
1.66
7376--7519
71
2.0
71
87
2
209
36
15
4
43
1.69
16440--16483
6
7.3
6
84
7
54
50
2
15
31
1.57
17042--17092
22
2.2
24
83
16
72
41
0
0
58
0.98
17042--17090
25
2.0
25
84
8
64
40
0
0
59
0.98
17726--17772
9
5.3
9
92
2
78
46
0
19
34
1.50

Tables:   1

The End!