Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023459.1 Corchorus olitorius cultivar O-4 contig23492, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28041

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
841--891
19
2.7
19
77
14
61
50
1
0
47
1.12
1798--2042
127
1.9
127
82
1
301
38
13
8
39
1.75
6125--6462
177
1.9
177
98
1
651
35
22
9
33
1.86
7213--7256
21
2.1
21
86
0
61
68
0
27
4
1.09
7676--7732
3
19.0
3
100
0
114
66
0
0
33
0.92
14867--14920
28
1.9
28
84
0
72
42
5
14
37
1.69
27067--27324
107
2.5
105
91
2
412
40
8
8
42
1.66
27509--27567
31
1.9
31
89
0
91
44
6
11
37
1.68

Tables:   1

The End!