Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023467.1 Corchorus olitorius cultivar O-4 contig23500, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4789

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42--247
103
2.0
103
96
0
376
29
15
33
21
1.94
640--673
11
3.1
11
100
0
68
8
44
8
38
1.67
3812--4001
66
2.9
66
89
1
283
25
9
23
41
1.84
3816--4044
33
6.9
32
76
5
147
27
9
22
40
1.85
3833--4034
66
3.1
66
84
4
176
27
9
22
40
1.85
3849--4034
99
1.9
99
80
6
216
26
9
23
41
1.84

Tables:   1

The End!