Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023474.1 Corchorus olitorius cultivar O-4 contig23507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17840

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100--171
35
2.1
35
97
0
135
44
12
19
23
1.85
598--687
30
3.0
30
88
3
135
21
18
8
51
1.73
598--681
31
2.8
30
90
3
132
21
19
8
51
1.73
2881--2914
15
2.3
15
89
0
50
23
2
38
35
1.70
9910--9958
21
2.3
21
86
6
64
24
4
4
67
1.26
10709--10753
21
2.1
21
87
0
63
13
24
33
28
1.93

Tables:   1

The End!