Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023494.1 Corchorus olitorius cultivar O-4 contig23527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24444

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
226--262
19
1.9
19
100
0
74
37
16
2
43
1.62
7087--7145
31
1.9
31
100
0
118
40
11
20
27
1.87
7176--7250
33
2.2
34
88
6
109
17
28
5
49
1.68
8686--8815
35
3.7
35
90
0
188
35
12
25
26
1.91
16515--16583
27
2.5
28
88
2
95
44
20
15
18
1.86
18331--18363
17
1.9
17
93
0
57
12
27
3
57
1.49
19819--19850
15
2.1
16
94
5
57
18
0
34
46
1.49

Tables:   1

The End!