Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023498.1 Corchorus olitorius cultivar O-4 contig23531, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16822

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--515
196
2.6
198
91
4
833
34
13
16
35
1.89
10--515
197
2.5
200
89
6
801
34
14
16
35
1.89
852--882
16
1.9
16
93
0
53
54
0
9
35
1.33
2265--2308
23
1.9
23
81
9
54
59
0
11
29
1.32
4427--4466
21
2.0
21
85
5
55
20
5
5
70
1.26
5719--5755
15
2.5
15
90
0
56
43
43
8
5
1.57
7584--7639
17
3.3
17
97
0
103
50
10
8
30
1.68
8172--8205
11
3.1
11
82
0
50
41
0
17
41
1.50
13031--13085
21
2.6
21
97
0
101
38
14
20
27
1.91

Tables:   1

The End!