Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023503.1 Corchorus olitorius cultivar O-4 contig23536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6886

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
651--699
24
2.0
24
100
0
98
28
16
4
51
1.63
941--980
21
1.9
21
85
10
55
30
20
17
32
1.95
2503--2578
29
2.6
30
85
4
93
11
11
35
40
1.79
4485--4526
2
21.5
2
90
4
68
50
0
2
47
1.14
4618--4946
43
7.8
42
83
8
418
21
10
25
42
1.84
4615--4946
84
3.9
84
92
2
540
21
10
25
42
1.85

Tables:   1

The End!