Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023506.1 Corchorus olitorius cultivar O-4 contig23539, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5715

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2466--2519
21
2.6
22
74
11
60
18
3
5
72
1.20
3338--3415
22
3.6
22
79
5
79
38
8
15
37
1.79
3340--3389
21
2.3
23
82
10
68
40
8
16
36
1.77
3292--3415
43
2.8
44
78
10
112
38
9
15
36
1.80

Tables:   1

The End!