Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023510.1 Corchorus olitorius cultivar O-4 contig23543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24051

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2208--2337
45
2.9
45
94
0
224
38
21
5
34
1.76
4069--4326
84
3.1
84
85
6
335
49
2
10
37
1.51
4419--4503
42
2.0
42
90
0
134
38
10
9
41
1.72
8837--8868
4
7.8
4
93
6
55
21
0
0
78
0.76
8837--8869
13
2.6
13
95
4
59
21
0
0
78
0.75
8835--8876
17
2.6
17
92
7
70
21
0
0
78
0.75
18872--18915
17
2.8
16
86
6
63
2
43
40
13
1.57
19791--19857
21
3.2
21
64
16
57
50
14
5
28
1.66
19778--19858
42
1.9
42
97
0
153
46
16
7
29
1.73
22043--22081
11
3.4
11
86
10
51
28
10
2
58
1.44
22133--22234
50
2.1
49
94
1
177
34
6
4
53
1.49

Tables:   1

The End!