Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023511.1 Corchorus olitorius cultivar O-4 contig23544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18300

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
925--991
35
2.0
35
85
5
93
47
7
10
34
1.66
1271--1310
15
2.6
16
88
4
55
62
12
10
15
1.54
4326--4389
30
2.1
30
94
0
110
32
21
20
25
1.97
5199--5269
21
3.4
21
88
0
106
26
23
19
29
1.98
7921--8244
177
1.8
177
85
4
456
35
16
12
35
1.87
14953--15026
27
2.7
27
85
2
94
37
28
16
17
1.91

Tables:   1

The End!