Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023513.1 Corchorus olitorius cultivar O-4 contig23546, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26784

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1935--1970
14
2.6
14
100
0
72
16
25
13
44
1.85
10404--10436
16
2.1
16
94
0
57
39
6
3
51
1.42
10814--10847
12
2.8
12
86
0
50
5
0
20
73
1.04
16337--16387
23
2.2
23
82
0
57
41
17
17
23
1.90
16408--16450
21
2.1
20
82
4
50
46
4
2
46
1.36
17689--17742
26
2.2
24
87
9
74
16
3
5
74
1.16
18508--18544
19
2.0
19
94
5
67
67
0
0
32
0.91

Tables:   1

The End!