Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023514.1 Corchorus olitorius cultivar O-4 contig23547, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14821

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--60
22
2.1
22
88
0
67
34
8
14
42
1.77
144--223
22
3.6
22
81
6
81
35
12
16
36
1.86
193--243
22
2.4
22
96
3
95
39
11
15
33
1.84
276--328
22
2.4
22
90
0
79
49
9
9
32
1.67
338--380
22
2.0
22
90
0
68
41
6
6
44
1.58
5995--6256
107
2.5
106
91
2
404
40
9
9
40
1.69
14526--14581
29
2.0
28
92
3
94
39
21
10
28
1.87

Tables:   1

The End!