Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023516.1 Corchorus olitorius cultivar O-4 contig23549, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4808

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
564--592
6
5.0
6
91
8
51
0
13
0
86
0.58
564--597
11
3.0
11
91
4
50
0
14
0
85
0.60
564--597
12
2.9
11
91
8
50
0
14
0
85
0.60
2969--3018
25
2.0
26
92
4
84
30
0
24
46
1.53
3969--4009
16
2.6
16
100
0
82
24
14
14
46
1.82

Tables:   1

The End!