Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023518.1 Corchorus olitorius cultivar O-4 contig23551, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21112

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1976--2070
30
3.1
31
75
15
83
23
20
11
45
1.83
2094--2175
32
2.6
32
82
3
94
20
26
23
29
1.99
9155--9233
40
2.0
40
100
0
158
30
31
7
30
1.85
9553--9626
21
3.5
21
69
20
73
22
5
44
27
1.74
9560--9641
42
2.0
42
100
0
164
21
3
47
26
1.67

Tables:   1

The End!