Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023519.1 Corchorus olitorius cultivar O-4 contig23552, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21214

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4074--4114
12
3.4
12
89
0
64
34
2
53
9
1.47
4179--4211
15
2.2
15
94
0
57
30
3
39
27
1.72
8918--8957
21
1.9
21
94
0
71
35
5
52
7
1.51
9073--9103
15
2.1
15
93
0
53
38
0
22
38
1.54
17145--17205
30
2.0
30
87
6
88
29
8
11
50
1.67
20015--20041
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!