Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023520.1 Corchorus olitorius cultivar O-4 contig23553, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5647

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
492--570
12
6.5
12
88
2
113
34
12
24
29
1.92
492--570
24
3.2
24
94
1
131
34
12
24
29
1.92
2175--2214
13
2.9
13
88
7
53
37
10
0
52
1.35
2543--2579
10
3.8
10
92
7
67
40
0
21
37
1.54
3114--3152
19
2.0
20
90
5
62
84
12
0
2
0.72
3111--3152
20
2.0
20
86
4
57
83
14
0
2
0.75

Tables:   1

The End!