Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023524.1 Corchorus olitorius cultivar O-4 contig23557, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6118

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
386--429
18
2.4
18
77
7
54
31
4
0
63
1.14
2227--2400
73
2.4
72
83
12
196
40
17
14
27
1.89
2296--2408
38
3.0
37
82
14
151
41
15
14
28
1.86
2271--2408
73
1.9
74
88
7
210
40
16
14
28
1.88
2228--2404
35
4.9
35
78
17
166
40
17
14
27
1.89
3367--3392
12
2.2
12
100
0
52
53
30
7
7
1.57
5830--5881
25
2.1
25
100
0
104
38
25
15
21
1.92

Tables:   1

The End!