Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023525.1 Corchorus olitorius cultivar O-4 contig23558, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13364

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2578--2644
5
13.6
5
80
14
61
0
2
14
82
0.79
2578--2634
19
3.0
19
84
5
80
0
3
14
82
0.80
2598--2640
14
2.9
15
82
10
52
0
2
18
79
0.85
4921--4950
11
2.7
11
94
0
51
66
0
0
33
0.92
4921--4950
14
2.1
14
93
0
51
66
0
0
33
0.92
7119--7144
2
13.0
2
100
0
52
50
0
0
50
1.00
11056--11085
6
5.0
6
100
0
60
83
16
0
0
0.65
12765--12789
8
3.1
8
100
0
50
64
0
0
36
0.94

Tables:   1

The End!