Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023526.1 Corchorus olitorius cultivar O-4 contig23559, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26646

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6819--6912
45
2.2
42
86
7
127
37
5
20
37
1.75
7810--7838
13
2.1
14
93
6
51
68
0
0
31
0.89
8414--8485
13
5.3
13
75
15
65
29
0
13
56
1.38
9327--9509
90
2.0
90
95
0
330
49
11
8
31
1.68
10785--10884
15
6.8
13
75
20
74
14
23
27
36
1.93
10785--10887
30
3.4
30
82
7
129
13
23
26
36
1.92
12116--12217
18
5.7
18
85
0
141
13
20
39
26
1.90
12114--12217
36
2.9
36
95
0
181
14
20
38
26
1.91
12767--12895
49
2.7
47
82
9
152
51
4
17
26
1.64
14169--14206
9
4.3
9
83
3
51
31
26
0
42
1.56
14169--14206
18
2.2
17
90
4
58
31
26
0
42
1.56
14955--15100
72
2.1
70
96
2
265
41
10
29
19
1.84
15937--16001
31
2.2
29
83
5
76
33
13
24
27
1.93
20743--20853
54
2.1
54
100
0
222
37
10
16
35
1.83
21144--21231
41
2.2
40
89
4
131
43
29
14
12
1.83
25181--25237
20
2.8
20
78
7
71
29
8
7
54
1.58

Tables:   1

The End!