Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023533.1 Corchorus olitorius cultivar O-4 contig23566, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9527

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1642--1830
41
4.6
40
85
5
218
20
13
17
48
1.80
1642--1809
81
2.0
83
87
2
241
19
13
16
50
1.78
1642--1809
41
4.1
41
86
2
221
19
13
16
50
1.78
1642--1851
83
2.6
82
83
4
201
20
13
16
49
1.79
2744--2788
21
2.1
21
87
0
63
73
6
13
6
1.24
6325--6360
19
1.9
18
88
5
54
33
22
2
41
1.68

Tables:   1

The End!