Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023541.1 Corchorus olitorius cultivar O-4 contig23574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53174

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1041--1142
51
2.0
51
98
0
195
46
13
14
25
1.82
4615--4661
2
23.5
2
95
0
76
44
0
4
51
1.21
5110--5148
4
9.8
4
100
0
78
51
0
23
25
1.49
8206--8236
10
3.1
10
90
0
53
48
19
3
29
1.64
9405--9478
31
2.4
31
90
0
112
32
12
17
37
1.87
9715--9862
75
1.9
77
86
2
210
39
4
16
39
1.68
15571--15604
12
2.8
12
86
0
50
2
17
0
79
0.86
27740--27772
6
5.5
6
100
0
66
36
0
15
48
1.45
27914--27945
16
2.0
16
93
0
55
15
25
6
53
1.65
28602--28670
27
2.6
27
100
0
138
27
0
17
55
1.43
29686--29748
27
2.3
27
88
0
90
20
19
28
31
1.97
29871--30150
132
2.1
132
93
0
479
29
12
34
23
1.92
36253--36286
17
2.0
17
88
0
50
61
14
2
20
1.46
42677--42709
17
1.9
17
88
11
50
57
9
3
30
1.45

Tables:   1

The End!