Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023551.1 Corchorus olitorius cultivar O-4 contig23584, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9803

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4675--4707
15
2.3
15
89
5
50
48
3
12
36
1.56
6213--6683
36
13.3
35
78
6
362
19
21
18
40
1.92
6213--6652
145
3.1
142
77
6
442
20
21
18
40
1.92
6246--6506
109
2.4
108
82
3
326
18
21
18
41
1.90
6618--6688
31
2.3
31
95
0
124
16
19
18
45
1.86
6918--7114
30
6.6
30
89
2
254
21
14
16
46
1.83
6918--7401
60
8.2
60
81
7
503
19
13
19
47
1.82
6918--7401
90
5.5
89
79
10
451
19
13
19
47
1.82
7095--7133
19
2.1
19
100
0
78
17
5
20
56
1.60
7121--7401
30
9.4
30
86
0
357
18
12
20
48
1.80
7897--7972
29
2.7
27
83
6
89
18
15
28
36
1.92
9432--9483
15
3.3
15
73
19
52
13
55
0
30
1.38

Tables:   1

The End!