Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023558.1 Corchorus olitorius cultivar O-4 contig23591, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22010

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7886--7942
22
2.6
21
83
8
78
12
43
5
38
1.65
8260--8330
33
2.2
33
89
0
106
14
32
43
9
1.78
9029--9159
69
1.9
67
84
10
176
49
16
9
24
1.75
13433--13487
15
3.7
14
80
9
56
14
74
0
10
1.07
17305--17344
21
1.9
21
89
0
62
27
37
20
15
1.92
17327--17448
50
2.4
50
87
2
174
36
22
21
19
1.95
17427--17469
22
2.0
22
85
0
59
25
32
20
20
1.97
18860--19179
22
14.5
21
71
13
110
32
15
13
38
1.87
19036--19098
23
2.7
23
90
0
90
39
11
9
39
1.73
19011--19098
46
1.9
46
81
2
106
37
12
12
37
1.81
19090--19175
44
2.0
44
86
9
122
27
19
11
40
1.86
19609--19677
27
2.5
26
81
6
75
44
4
8
42
1.55

Tables:   1

The End!