Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023565.1 Corchorus olitorius cultivar O-4 contig23598, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27301

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2499--2994
67
7.4
67
91
2
750
22
20
14
41
1.89
17439--17526
45
2.0
43
86
6
124
37
22
4
35
1.75
21726--21750
13
1.9
13
100
0
50
48
0
4
48
1.20
22337--22398
32
1.9
32
83
0
79
43
9
4
41
1.59
24131--24161
7
4.4
7
100
0
62
41
29
12
16
1.85
26297--26321
13
1.9
13
100
0
50
40
8
12
40
1.72

Tables:   1

The End!