Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023571.1 Corchorus olitorius cultivar O-4 contig23604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9913

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1435--1479
14
3.3
15
79
14
53
51
8
6
33
1.59
1429--1480
12
4.1
12
77
20
52
44
7
7
40
1.62
1779--1810
7
4.4
7
96
4
55
81
0
18
0
0.70
1773--1832
25
2.4
26
78
10
72
73
0
20
6
1.05
3129--3667
8
69.6
8
66
18
157
27
21
5
45
1.73
3204--3245
21
2.0
20
90
4
66
26
19
0
54
1.44
3333--3514
22
8.2
22
78
6
152
27
19
7
45
1.76
3486--3619
14
9.2
13
70
20
65
28
23
4
44
1.73
3509--3667
22
7.2
22
82
7
171
27
25
3
43
1.70
3428--3643
81
2.6
81
82
10
233
27
22
5
45
1.73
6890--6950
18
3.4
17
71
13
50
16
11
24
47
1.79
7379--7506
68
1.9
67
96
1
238
21
18
12
46
1.82

Tables:   1

The End!