Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023573.1 Corchorus olitorius cultivar O-4 contig23606, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13229

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
451--549
22
4.5
22
74
6
85
35
17
11
36
1.85
641--725
22
3.8
22
76
6
89
31
15
14
38
1.87
707--807
22
4.6
23
71
8
86
36
16
9
36
1.82
3567--4645
333
3.3
324
79
8
1044
37
15
13
33
1.87
4777--4817
20
2.0
20
100
0
82
53
9
0
36
1.34
4797--6724
330
5.8
328
78
7
1792
37
16
13
32
1.88
4797--6691
661
2.8
660
77
7
1734
37
16
13
32
1.87
5722--6690
341
2.8
340
79
9
945
37
15
13
33
1.86
6059--6685
347
1.8
347
86
2
929
38
14
12
34
1.84
6733--8226
331
4.6
331
78
9
1264
36
15
14
34
1.87
8894--8926
2
16.5
2
100
0
66
51
0
0
48
1.00
9084--9127
23
1.9
23
81
9
54
31
13
6
47
1.69
10188--10270
30
3.0
27
84
10
121
42
3
3
50
1.37

Tables:   1

The End!