Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023577.1 Corchorus olitorius cultivar O-4 contig23610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6523

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
795--819
2
12.5
2
100
0
50
48
0
0
52
1.00
2724--2791
25
2.8
24
88
4
93
44
10
1
44
1.47
2724--2791
23
2.9
23
84
10
84
44
10
1
44
1.47
2725--2833
12
9.5
12
71
20
67
43
10
0
45
1.44
2736--2829
38
2.5
35
77
17
93
42
9
1
46
1.43
4952--5018
21
3.2
21
64
16
57
50
14
5
28
1.66
4940--5019
42
1.9
42
94
0
142
47
17
6
28
1.72
6197--6313
57
2.0
58
95
1
209
40
1
24
33
1.66

Tables:   1

The End!