Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023584.1 Corchorus olitorius cultivar O-4 contig23617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12213

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3494--3822
43
7.8
43
85
6
440
41
25
10
21
1.85
3494--3822
84
3.9
84
94
0
561
41
25
10
21
1.85
5949--5995
11
4.7
10
80
17
53
40
6
21
31
1.78
5960--5995
19
1.9
18
88
5
54
41
2
22
33
1.68
9352--9450
51
1.9
52
95
2
182
28
22
3
46
1.66
10624--10663
15
2.6
16
84
4
55
62
15
10
12
1.54
11991--12026
18
1.9
18
88
5
54
36
22
2
38
1.69

Tables:   1

The End!