Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023590.1 Corchorus olitorius cultivar O-4 contig23623, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5919

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4005--4439
162
2.7
159
80
9
477
38
20
25
14
1.91
4005--4439
40
10.8
40
83
4
507
38
20
25
14
1.91
4408--5693
47
27.7
47
84
4
1510
40
20
23
15
1.90
4973--5126
82
1.9
80
85
5
211
37
19
25
17
1.93
4973--5127
40
3.8
40
85
6
188
37
20
25
17
1.94
5722--5919
41
4.9
41
83
4
233
38
17
27
15
1.90

Tables:   1

The End!