Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023592.1 Corchorus olitorius cultivar O-4 contig23625, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16911

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5022--5259
43
5.6
43
83
7
326
43
25
9
21
1.83
5022--5267
84
2.9
84
96
0
447
43
25
9
21
1.83
5374--5404
2
15.5
2
93
0
53
48
3
0
48
1.17
7901--7939
2
19.0
2
94
5
69
48
2
0
48
1.15
8102--8241
55
2.5
55
92
0
226
36
15
5
42
1.69
11507--11536
13
2.3
13
100
0
60
20
0
56
23
1.42
12985--13016
16
2.0
16
100
0
64
25
37
12
25
1.91
14447--14588
73
1.9
73
89
0
221
29
21
27
21
1.98

Tables:   1

The End!