Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023595.1 Corchorus olitorius cultivar O-4 contig23628, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14470

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
600--698
52
1.9
52
91
0
162
23
20
8
48
1.76
657--963
48
6.6
48
77
9
289
27
18
6
47
1.73
802--1124
36
8.9
36
75
20
200
26
16
4
52
1.62
754--913
84
1.9
84
93
0
275
27
17
5
49
1.69
723--989
132
2.0
131
91
0
426
27
17
6
48
1.71
963--1015
26
2.0
26
92
0
88
24
15
5
54
1.62
934--1113
62
2.9
62
97
0
342
24
16
3
55
1.57
1025--1077
26
2.0
26
100
0
106
22
15
3
58
1.53
1086--1471
47
8.4
47
89
5
583
29
16
4
49
1.66
1051--1448
180
2.2
178
89
4
624
29
16
4
49
1.66
4894--4963
26
2.6
27
88
2
97
35
27
20
17
1.94

Tables:   1

The End!