Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023601.1 Corchorus olitorius cultivar O-4 contig23634, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12806

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
296--412
21
5.6
21
92
2
182
27
27
15
29
1.96
1536--1746
29
7.4
29
83
2
257
44
21
14
19
1.87
1532--1746
85
2.5
84
85
3
288
43
21
14
20
1.87
2026--2664
59
10.8
59
87
4
768
41
17
15
25
1.89
3520--3618
36
2.7
38
83
12
141
14
19
11
55
1.68
4419--4485
27
2.5
27
90
0
98
16
17
25
40
1.90
4593--4659
27
2.5
27
87
0
89
16
16
25
41
1.88
6193--6282
26
3.4
26
93
3
144
34
31
8
25
1.87

Tables:   1

The End!