Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023613.1 Corchorus olitorius cultivar O-4 contig23646, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5062

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1732--1851
42
2.8
43
78
5
100
25
20
12
42
1.86
3337--3375
12
3.2
12
85
0
60
58
12
2
25
1.47
3742--3812
7
10.1
7
100
0
142
71
0
14
14
1.14
3742--3820
21
3.9
21
95
3
117
72
0
13
13
1.13
4825--5062
35
6.9
35
88
7
351
31
21
18
27
1.97
4825--5062
69
3.4
70
86
8
360
31
21
18
27
1.97

Tables:   1

The End!