Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023628.1 Corchorus olitorius cultivar O-4 contig23661, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9057

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3386--3512
27
4.7
27
89
0
191
37
22
15
23
1.93
3759--3859
48
2.1
48
90
0
157
25
17
23
32
1.97
3851--4017
35
4.8
36
88
4
243
32
19
16
31
1.94
4719--4867
50
3.0
50
83
3
192
37
13
16
32
1.87
5462--5497
7
5.3
7
90
6
56
13
0
11
75
1.06
5451--5505
13
4.3
13
82
15
62
16
0
12
70
1.16
5457--5497
20
2.1
20
90
4
66
14
0
12
73
1.11
5901--5937
17
2.2
17
90
0
56
8
8
2
81
0.97
5883--5932
11
4.5
11
76
2
55
12
8
4
76
1.15
8110--8139
15
2.1
14
93
6
51
76
20
3
0
0.92

Tables:   1

The End!