Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023633.1 Corchorus olitorius cultivar O-4 contig23666, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27047

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2815--2847
17
2.0
17
88
5
50
69
6
9
15
1.34
10066--10125
29
2.2
28
91
8
97
40
6
10
43
1.64
11880--11918
14
2.8
13
88
7
51
87
0
7
5
0.68
11880--11918
20
2.0
19
90
5
60
87
0
7
5
0.68
14882--14936
24
2.3
24
77
0
74
23
5
14
56
1.59
20325--20359
17
2.1
17
89
10
54
8
5
14
71
1.29
20731--20770
21
1.9
21
84
0
53
32
5
0
62
1.17
22140--22683
122
4.5
121
81
7
611
37
13
11
38
1.80
22140--22684
123
4.5
122
81
7
610
37
13
11
38
1.80
23374--23438
29
2.2
29
97
0
121
32
16
23
27
1.96

Tables:   1

The End!