Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023639.1 Corchorus olitorius cultivar O-4 contig23672, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20767

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3974--4004
13
2.4
13
100
0
62
70
0
12
16
1.16
3974--4003
7
4.4
7
91
8
53
73
0
13
13
1.10
4390--4429
15
2.7
15
80
0
53
77
10
2
10
1.08
6056--6296
69
3.5
69
93
0
410
26
26
15
31
1.96
6343--6761
170
2.5
170
89
2
634
27
20
16
35
1.94
6865--7514
30
21.4
30
89
1
877
19
15
17
47
1.83
6865--7514
151
4.3
151
87
2
881
19
15
17
47
1.83
17497--17620
49
2.5
48
85
6
160
30
15
5
48
1.68
19941--20021
33
2.5
33
83
4
92
23
8
23
44
1.81

Tables:   1

The End!