Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023640.1 Corchorus olitorius cultivar O-4 contig23673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17814

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98--178
33
2.5
33
83
4
92
23
7
24
44
1.79
1969--2058
21
4.3
21
84
8
112
26
16
25
31
1.97
2917--2963
26
1.9
24
87
12
69
27
27
4
40
1.75
4508--4588
33
2.5
33
83
4
92
23
7
24
44
1.79
6381--6472
21
4.4
21
90
2
141
27
17
27
28
1.98

Tables:   1

The End!