Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023646.1 Corchorus olitorius cultivar O-4 contig23679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17367

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4850--4891
15
2.7
15
96
3
75
11
7
14
66
1.43
5050--5401
145
2.4
145
95
0
641
32
14
22
30
1.94
6624--6669
7
6.9
7
85
5
51
23
17
0
58
1.38
6674--6713
14
2.8
14
88
3
53
0
5
12
82
0.82
6676--6733
5
12.0
5
85
9
59
0
3
13
82
0.79
6676--6730
19
2.9
19
84
7
69
0
3
12
83
0.77
14692--14726
12
2.9
12
86
0
52
14
5
25
54
1.62
16914--16943
12
2.4
13
88
11
53
66
13
6
13
1.43

Tables:   1

The End!