Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023649.1 Corchorus olitorius cultivar O-4 contig23682, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20426

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1880--1911
16
1.9
17
93
6
57
81
0
9
9
0.88
2122--2151
12
2.4
13
88
11
53
66
13
6
13
1.43
8892--8926
2
17.5
2
100
0
70
51
0
0
48
1.00
8961--9142
83
2.2
84
83
8
212
24
10
24
40
1.86
8990--9149
43
3.8
43
87
8
240
21
10
26
42
1.84
12242--12306
28
2.3
28
86
7
96
30
9
4
55
1.52

Tables:   1

The End!