Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023655.1 Corchorus olitorius cultivar O-4 contig23688, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32182

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7061--7085
11
2.3
11
100
0
50
8
16
8
68
1.38
10683--10718
19
1.9
18
88
5
54
41
8
22
27
1.82
13102--13189
46
1.9
46
97
0
167
37
10
5
46
1.62
14083--14118
7
5.1
7
93
0
63
13
13
16
55
1.69
22720--22756
19
1.9
19
100
0
74
35
10
5
48
1.61
22884--22977
45
2.2
44
86
7
131
38
18
5
38
1.73
24627--24655
7
4.1
7
100
0
58
55
27
0
17
1.42
24768--24813
2
24.0
2
80
8
51
41
0
2
56
1.11
24769--24814
16
2.9
16
87
9
60
39
0
4
56
1.19
26726--26757
2
15.5
2
93
6
55
46
0
3
50
1.17

Tables:   1

The End!