Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023662.1 Corchorus olitorius cultivar O-4 contig23695, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7356

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1362
30
45.1
30
86
3
1633
47
19
13
19
1.82
1114--1189
38
2.0
37
84
2
98
44
17
17
21
1.86
1624--2144
36
14.9
36
83
6
551
41
19
20
18
1.90
1743--1801
26
2.3
26
90
0
91
38
18
23
18
1.93
1769--2201
140
3.1
140
86
3
564
40
19
21
18
1.91
1769--2201
36
12.2
35
85
2
465
40
19
21
18
1.91

Tables:   1

The End!