Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023663.1 Corchorus olitorius cultivar O-4 contig23696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4458

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
490--531
12
3.6
11
90
9
66
14
0
0
85
0.59
486--531
23
2.0
24
95
4
85
15
0
0
84
0.62
478--532
27
2.1
26
89
3
83
16
0
0
83
0.64
486--533
13
4.0
12
91
8
80
16
0
0
83
0.65
1633--1742
58
1.9
58
84
3
150
33
12
19
34
1.89
3018--3087
36
1.9
36
88
0
104
22
10
7
60
1.53
3921--4001
39
2.0
40
92
2
137
37
3
8
50
1.51

Tables:   1

The End!