Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023665.1 Corchorus olitorius cultivar O-4 contig23698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17277

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
291--398
27
4.0
27
86
4
139
37
27
19
15
1.92
291--398
55
2.0
53
85
7
146
37
27
19
15
1.92
8227--8251
3
8.3
3
100
0
50
36
0
0
64
0.94
11643--11678
19
1.9
18
88
5
54
36
30
8
25
1.85
16127--16249
33
3.8
33
78
3
115
43
21
7
28
1.79
16135--16261
66
1.9
66
85
3
175
43
21
7
27
1.80
16845--16876
15
2.1
15
100
0
64
15
6
28
50
1.68

Tables:   1

The End!