Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023671.1 Corchorus olitorius cultivar O-4 contig23704, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4472

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1319--1366
25
1.9
25
95
0
87
39
10
18
31
1.85
1361--1444
39
2.2
39
97
0
159
45
17
13
23
1.84
2101--2367
69
3.9
68
89
1
381
28
16
28
26
1.97
3653--3694
17
2.3
18
80
19
52
7
14
0
78
0.95
4009--4038
8
3.6
8
91
8
51
10
0
10
80
0.92
4009--4039
9
3.6
9
95
4
55
9
0
9
80
0.90
4419--4459
8
5.2
8
94
5
75
12
12
0
75
1.05
4419--4459
15
2.6
16
96
3
75
12
12
0
75
1.05

Tables:   1

The End!