Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023680.1 Corchorus olitorius cultivar O-4 contig23713, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33693

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11814--11889
27
2.7
28
81
4
91
36
26
17
19
1.94
18352--18449
35
2.8
35
84
3
126
30
19
23
26
1.98
18452--18744
90
3.3
90
89
5
460
28
15
24
31
1.96
19062--19135
27
2.7
27
83
6
87
20
18
25
35
1.96
21984--22017
14
2.2
16
90
10
54
23
5
41
29
1.78

Tables:   1

The End!