Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023683.1 Corchorus olitorius cultivar O-4 contig23716, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19306

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
627--669
16
2.7
15
89
10
68
11
6
13
67
1.41
3968--4022
21
2.6
21
85
5
67
16
47
21
14
1.82
7254--7295
15
2.7
15
96
3
75
11
7
14
66
1.43
11954--11993
15
2.6
16
88
4
55
62
12
10
15
1.54
13281--13311
10
3.2
10
95
4
55
64
19
0
16
1.29

Tables:   1

The End!