Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023686.1 Corchorus olitorius cultivar O-4 contig23719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11276

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3932--3976
24
1.9
23
81
4
54
15
40
42
2
1.59
3966--4034
23
3.0
23
97
2
129
15
43
36
4
1.67
3970--4034
12
5.6
12
78
7
80
16
44
33
4
1.69
4926--4985
27
2.2
27
82
8
68
36
15
11
36
1.83
6363--6400
15
2.5
15
95
0
67
15
28
39
15
1.89
11127--11186
27
2.2
27
82
8
68
36
15
11
36
1.83

Tables:   1

The End!