Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023687.1 Corchorus olitorius cultivar O-4 contig23720, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17363

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6031--6066
19
1.9
18
88
5
54
36
22
0
41
1.54
6026--6077
11
5.1
10
77
17
54
38
19
1
40
1.63
7676--7707
15
2.1
15
100
0
64
12
15
25
46
1.81
7870--7923
21
2.6
21
78
0
54
11
20
48
20
1.80
10991--11020
9
3.3
9
100
0
60
70
20
0
10
1.16
11116--11179
28
2.3
26
82
15
67
28
12
6
53
1.62
14595--14785
32
6.0
32
78
11
189
25
19
24
30
1.98
14581--14771
64
3.0
64
86
1
267
24
19
25
30
1.98
17168--17286
27
4.4
27
92
0
184
21
21
38
18
1.93

Tables:   1

The End!