Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023693.1 Corchorus olitorius cultivar O-4 contig23726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61937

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189--218
15
2.1
14
93
6
51
63
0
3
33
1.11
4517--4682
82
2.0
82
98
0
323
42
23
10
24
1.85
5860--5884
12
2.1
12
100
0
50
84
0
16
0
0.63
6646--6699
25
2.1
27
89
6
85
35
11
18
35
1.86
23860--23897
20
1.9
20
89
10
60
57
5
0
36
1.21
30325--31398
434
2.5
432
83
4
1256
30
14
12
42
1.82
30329--31351
433
2.4
431
84
5
1276
30
14
12
42
1.83
32077--32230
77
2.0
77
92
2
256
33
26
17
22
1.96
39598--39637
15
2.6
16
88
4
55
62
12
10
15
1.54
46281--46320
15
2.6
16
88
4
55
15
10
12
62
1.54
50285--50314
15
2.1
14
93
6
51
20
16
0
63
1.31
55338--55396
15
3.7
15
80
13
57
13
13
11
61
1.58
56383--56412
7
4.3
7
100
0
60
56
0
43
0
0.99
56758--56975
92
2.4
91
80
6
226
37
6
14
41
1.72

Tables:   1

The End!